Tresset, G 2024 Glass-like relaxation dynamics during the disorder-order transition of viral nucleocapsids.
Tresset, G 2023 Antivirals alter the kinetic assembly pathway and elastic properties of Hepatitis B virus capsids.
Chang, L-H, Ghosh, S, Papale, A, Luppino, J M, Miranda, M, Piras, V, Degrouard, J, Edouard, J, Poncelet, M, Lecouvreur, N, Bloyer, S, Leforestier, A, Joyce, E F, Holcman, D, and Noordermeer, D 2023 Multi-feature clustering of CTCF binding creates robustness for loop extrusion blocking and Topologically Associating Domain boundaries. Nature Communications, 14(1): 5615. DOI: https://doi.org/10.1038/s41467-023-41265-y
Jeon, W, Choi, C, Cheon, J, Lee, J, Lansac, Y, and Jang, Y H 2023 Narrow–Wide Copolymers Designed for Red-Selective Absorption by Time-Dependent Density Functional Theory Calculations. The Journal of Physical Chemistry C, 127(31): 15290–15299. DOI: https://doi.org/10.1021/acs.jpcc.3c01587
Kra, K, Li, S, Gargowitsch, L, Degrouard, J, Pérez, J, Zandi, R, Bressanelli, S, and Tresset, G 2023 Energetics and Kinetic Assembly Pathways of Hepatitis B Virus Capsids in the Presence of Antivirals. ACS Nano, 17(13): 12723–12733. DOI: https://doi.org/10.1021/acsnano.3c03595
Chaupard, M, Degrouard, J, Li, X, Stéphan, O, Kociak, M, Gref, R, and de Frutos, M 2023 Nanoscale Multimodal Analysis of Sensitive Nanomaterials by Monochromated STEM-EELS in Low-Dose and Cryogenic Conditions. ACS Nano, 17(4): 3452–3464. DOI: https://doi.org/10.1021/acsnano.2c09571
Leforestier, A 2023 Order and disorder in DNA toroids.
Tresset, G 2023 Viruses as bioinspired nanocapsules.
Leforestier, A 2023 Morphogenèse des tores d’ADN condensé : vers la microscopie électronique en phase liquide.
Gaichies, T 2023 Entraînement d’air par un jet incliné.
Leforestier, A 2023 Optimization of cryo-tomography of vitreous sections for tissue and cell imaging.
Leforestier, A 2023 Cryo-electron tomography reveals chromatin landscape at the nanometer scale in situ.
Leforestier, A 2023 Role of surfactants in electron cryo-microscopy thin film preparation.
Michon, B, López-Sánchez, U, Degrouard, J, Nury, H, Leforestier, A, Rio, E, Salonen, A, and Zoonens, M 2023 Role of surfactants in electron cryo-microscopy film preparation. Biophysical Journal, 122(10): 1846–1857. DOI: https://doi.org/10.1016/j.bpj.2023.04.016
Leforestier, A 2023 Electrostatic zipper tunes the DNA double helix conformation and the toroid morphology.
Leforestier, A 2023 Electrostatic zipper in toroidal DNA condensates.
Leforestier, A 2023 Cryo-electron tomography reveals chromatin landscape at the nanometer scale in situ.
Chhetri, K B, Jang, Y H, Lansac, Y, and Maiti, P K 2023 DNA groove preference shift upon phosphorylation of a protamine-like cationic peptide. Physical Chemistry Chemical Physics, 25(45): 31335–31345. DOI: https://doi.org/10.1039/D3CP03803C
Tresset, G 2023 Energetics and kinetic assembly pathways of Hepatitis B virus in the presence of antivirals.
Delecourt, G, Plet, L, Guen, Y L, Tezgel, O, Tresset, G, Midoux, P, Montier, T, Bennevault, V, and Guégan, P 2022 Synthesis of Double Hydrophilic Block Copolymers Poly(2‐isopropyl‐2‐oxazoline‐ b ‐ethylenimine) and their DNA Transfection Efficiency. Macromolecular Bioscience, 2200296. DOI: https://doi.org/10.1002/mabi.202200296
Leforestier, A 2022 Optimisation de la cryo-microscopie de sections vitreuses pour l’imagerie cellulaire.
Leforestier, A 2022 Morphogénèse et ultrastructure des tores d’ADN condensé.
Leforestier, A 2022 La cryo-microscopie électronique pour l’imagerie en physique des matériaux hydratés.
Leforestier, A 2022 Cryo-electron tomography reveals chromatin landscape at the nanometer scale in situ.
Usma, C L, Mariot, S, Goldmann, C, Roché, M, Salonen, A, and Tresset, G 2022 Fluorescent Marangoni Flows under Quasi-Steady Conditions. Langmuir, 38(30): 9129–9135. DOI: https://doi.org/10.1021/acs.langmuir.2c00619
Choi, C, de Izarra, A, Han, I, Jeon, W, Lansac, Y, and Jang, Y H 2022 Hard-Cation-Soft-Anion Ionic Liquids for PEDOT:PSS Treatment. The Journal of Physical Chemistry B, 126(7): 1615–1624. DOI: https://doi.org/10.1021/acs.jpcb.1c09001
Chhetri, K B, Jang, Y H, Lansac, Y, and Maiti, P K 2022 Effect of phosphorylation of protamine-like cationic peptide on the binding affinity to DNA. Biophysical Journal, 121(24): 4830–4839. DOI: https://doi.org/10.1016/j.bpj.2022.09.025
Harastani, M, Eltsov, M, Leforestier, A, and Jonic, S 2022 TomoFlow: Analysis of Continuous Conformational Variability of Macromolecules in Cryogenic Subtomograms based on 3D Dense Optical Flow. Journal of Molecular Biology, 434(2): 167381. DOI: https://doi.org/10.1016/j.jmb.2021.167381
Leforestier, A 2022 Order and disporder in DNA toroids.
Kra, K 2022 Self-assembly kinetic pathways of hepatitis B virus capsids in the presence or not of antivirals.
Ruszkowski, M, Strugala, A, Indyka, P, Tresset, G, Figlerowicz, M, and Urbanowicz, A 2022 Cryo-EM reconstructions of BMV-derived virus-like particles reveal assembly defects in the icosahedral lattice structure. Nanoscale, 14(8): 3224–3233. DOI: https://doi.org/10.1039/D1NR05650F
Miguet, J, Pasquet, M, Rouyer, F, Fang, Y, and Rio, E 2021 Marginal regeneration-induced drainage of surface bubbles. Physical Review Fluids, 6(10): L101601. DOI: https://doi.org/10.1103/PhysRevFluids.6.L101601
Leforestier, A 2021 Ordre et désordre dans les tores d’ADN analysés par cryo tomographie électronique.
Leforestier, A 2021 Curved DNA hexagonal arrays in vitro & in vivo.
Delville, Pierre Henri 2021 Nage bactérienne et émergence de mouvements collectifs (TH). Orsay, France: Université Paris-Saclay.
Mukherjee, A, de Izarra, A, Degrouard, J, Olive, E, Maiti, P K, Jang, Y H, and Lansac, Y 2021 Protamine-Controlled Reversible DNA Packaging: A Molecular Glue. ACS Nano, 15(8): 13094–13104. DOI: https://doi.org/10.1021/acsnano.1c02337
Harastani, M, Eltsov, M, Leforestier, A, and Jonic, S 2021 HEMNMA-3D: Cryo Electron Tomography Method Based on Normal Mode Analysis to Study Continuous Conformational Variability of Macromolecular Complexes. Frontiers in Molecular Biosciences, 8: 663121. DOI: https://doi.org/10.3389/fmolb.2021.663121
Barberi, L, Livolant, F, Leforestier, A, and Lenz, M 2021 Local structure of DNA toroids reveals curvature-dependent intermolecular forces. Nucleic Acids Research, 49(7): 3709–3718. DOI: https://doi.org/10.1093/nar/gkab197
Mukherjee, A, Saurabh, S, Olive, E, Jang, Y H, and Lansac, Y 2021 Protamine Binding Site on DNA: Molecular Dynamics Simulations and Free Energy Calculations with Full Atomistic Details. The Journal of Physical Chemistry B, 125(12): 3032–3044. DOI: https://doi.org/10.1021/acs.jpcb.0c09166
de Izarra, A, Choi, C, Jang, Y H, and Lansac, Y 2021 Ionic Liquid for PEDOT:PSS Treatment. Ion Binding Free Energy in Water Revealing the Importance of Anion Hydrophobicity. The Journal of Physical Chemistry B, 125(7): 1916–1923. DOI: https://doi.org/10.1021/acs.jpcb.0c10068
Marichal, L, Gargowitsch, L, Rubim, R L, Sizun, C, Kra, K, Bressanelli, S, Dong, Y, Panahandeh, S, Zandi, R, and Tresset, G 2021 Relationships between RNA topology and nucleocapsid structure in a model icosahedral virus. Biophysical Journal, 120(18): 3925–3936. DOI: https://doi.org/10.1016/j.bpj.2021.08.021
Leforestier, A 2021 HEMNMA-3D: a new method for continuous conformational variability analysis of macromolecules. Application to cryo electron tomography of nucleosomes in situ.
Leforestier, A 2020 Exploring nucleosome conforation and local order in vitro & in situ.
Chevreuil, M, Lecoq, L, Wang, S, Gargowitsch, L, Nhiri, N, Jacquet, E, Zinn, T, Fieulaine, S, Bressanelli, S, and Tresset, G 2020 Nonsymmetrical Dynamics of the HBV Capsid Assembly and Disassembly Evidenced by Their Transient Species. The Journal of Physical Chemistry B, 124(45): 9987–9995. DOI: https://doi.org/10.1021/acs.jpcb.0c05024
Sanchez-Guzman, D, Giraudon--Colas, G, Marichal, L, Boulard, Y, Wien, F, Degrouard, J, Baeza-Squiban, A, Pin, S, Renault, J P, and Devineau, S 2020 In Situ Analysis of Weakly Bound Proteins Reveals Molecular Basis of Soft Corona Formation. ACS Nano, 14(7): 9073–9088. DOI: https://doi.org/10.1021/acsnano.0c04165
Marichal, L, Degrouard, J, Gatin, A, Raffray, N, Aude, J-C, Boulard, Y, Combet, S, Cousin, F, Hourdez, S, Mary, J, Renault, J-P, and Pin, S 2020 From Protein Corona to Colloidal Self-Assembly: The Importance of Protein Size in Protein–Nanoparticle Interactions. Langmuir, 36(28): 8218–8230. DOI: https://doi.org/10.1021/acs.langmuir.0c01334
Panahandeh, S, Li, S, Marichal, L, Leite Rubim, R, Tresset, G, and Zandi, R 2020 How a Virus Circumvents Energy Barriers to Form Symmetric Shells. ACS Nano, 14(3): 3170–3180. DOI: https://doi.org/10.1021/acsnano.9b08354
Chevreuil, M 2020 Phénomènes dynamiques d’auto-assemblage et désassemblage dans des virus icosaédriques (TH). Orsay, France: Université Paris-Saclay.
Du, H, de Oliveira, F A, Albuquerque, L J C, Tresset, G, Pavlova, E, Huin, C, Guégan, P, and Giacomelli, F C 2020 Polyglycidol-Stabilized Nanoparticles as a Promising Alternative to Nanoparticle PEGylation: Polymer Synthesis and Protein Fouling Considerations. Langmuir, 36(5): 1266–1278. DOI: https://doi.org/10.1021/acs.langmuir.9b03687
Ni, M, Tresset, G, Iliescu, C, and Hauser, C A E 2020 Ultrashort Peptide Theranostic Nanoparticles by Microfluidic-Assisted Rapid Solvent Exchange. IEEE Transactions on NanoBioscience, 19(4): 627–632. DOI: https://doi.org/10.1109/TNB.2020.3007103