Publications

Tresset, G 2023 Antivirals alter the kinetic assembly pathway and elastic properties of Hepatitis B virus capsids.

Jeon, W, Choi, C, Cheon, J, Lee, J, Lansac, Y, and Jang, Y H 2023 Narrow–Wide Copolymers Designed for Red-Selective Absorption by Time-Dependent Density Functional Theory Calculations. The Journal of Physical Chemistry C, 127(31): 15290–15299. DOI: https://doi.org/10.1021/acs.jpcc.3c01587

Kra, K, Li, S, Gargowitsch, L, Degrouard, J, Pérez, J, Zandi, R, Bressanelli, S, and Tresset, G 2023 Energetics and Kinetic Assembly Pathways of Hepatitis B Virus Capsids in the Presence of Antivirals. ACS Nano, 17(13): 12723–12733. DOI: https://doi.org/10.1021/acsnano.3c03595

Chaupard, M, Degrouard, J, Li, X, Stéphan, O, Kociak, M, Gref, R, and de Frutos, M 2023 Nanoscale Multimodal Analysis of Sensitive Nanomaterials by Monochromated STEM-EELS in Low-Dose and Cryogenic Conditions. ACS Nano, 17(4): 3452–3464. DOI: https://doi.org/10.1021/acsnano.2c09571

Tresset, G 2023 Viruses as bioinspired nanocapsules.

Gaichies, T 2023 Entraînement d’air par un jet incliné.

Michon, B, López-Sánchez, U, Degrouard, J, Nury, H, Leforestier, A, Rio, E, Salonen, A, and Zoonens, M 2023 Role of surfactants in electron cryo-microscopy film preparation. Biophysical Journal, 122(10): 1846–1857. DOI: https://doi.org/10.1016/j.bpj.2023.04.016

Tresset, G 2023 Energetics and kinetic assembly pathways of Hepatitis B virus in the presence of antivirals.

Delecourt, G, Plet, L, Guen, Y L, Tezgel, O, Tresset, G, Midoux, P, Montier, T, Bennevault, V, and Guégan, P 2022 Synthesis of Double Hydrophilic Block Copolymers Poly(2‐isopropyl‐2‐oxazoline‐ b ‐ethylenimine) and their DNA Transfection Efficiency. Macromolecular Bioscience, 2200296. DOI: https://doi.org/10.1002/mabi.202200296

Usma, C L, Mariot, S, Goldmann, C, Roché, M, Salonen, A, and Tresset, G 2022 Fluorescent Marangoni Flows under Quasi-Steady Conditions. Langmuir, 38(30): 9129–9135. DOI: https://doi.org/10.1021/acs.langmuir.2c00619

Choi, C, de Izarra, A, Han, I, Jeon, W, Lansac, Y, and Jang, Y H 2022 Hard-Cation-Soft-Anion Ionic Liquids for PEDOT:PSS Treatment. The Journal of Physical Chemistry B, 126(7): 1615–1624. DOI: https://doi.org/10.1021/acs.jpcb.1c09001

Chhetri, K B, Jang, Y H, Lansac, Y, and Maiti, P K 2022 Effect of phosphorylation of protamine-like cationic peptide on the binding affinity to DNA. Biophysical Journal, 121(24): 4830–4839. DOI: https://doi.org/10.1016/j.bpj.2022.09.025

Harastani, M, Eltsov, M, Leforestier, A, and Jonic, S 2022 TomoFlow: Analysis of Continuous Conformational Variability of Macromolecules in Cryogenic Subtomograms based on 3D Dense Optical Flow. Journal of Molecular Biology, 434(2): 167381. DOI: https://doi.org/10.1016/j.jmb.2021.167381

Kra, K 2022 Self-assembly kinetic pathways of hepatitis B virus capsids in the presence or not of antivirals.

Ruszkowski, M, Strugala, A, Indyka, P, Tresset, G, Figlerowicz, M, and Urbanowicz, A 2022 Cryo-EM reconstructions of BMV-derived virus-like particles reveal assembly defects in the icosahedral lattice structure. Nanoscale, 14(8): 3224–3233. DOI: https://doi.org/10.1039/D1NR05650F

Miguet, J, Pasquet, M, Rouyer, F, Fang, Y, and Rio, E 2021 Marginal regeneration-induced drainage of surface bubbles. Physical Review Fluids, 6(10): L101601. DOI: https://doi.org/10.1103/PhysRevFluids.6.L101601

Mukherjee, A, de Izarra, A, Degrouard, J, Olive, E, Maiti, P K, Jang, Y H, and Lansac, Y 2021 Protamine-Controlled Reversible DNA Packaging: A Molecular Glue. ACS Nano, 15(8): 13094–13104. DOI: https://doi.org/10.1021/acsnano.1c02337

Harastani, M, Eltsov, M, Leforestier, A, and Jonic, S 2021 HEMNMA-3D: Cryo Electron Tomography Method Based on Normal Mode Analysis to Study Continuous Conformational Variability of Macromolecular Complexes. Frontiers in Molecular Biosciences, 8: 663121. DOI: https://doi.org/10.3389/fmolb.2021.663121

Barberi, L, Livolant, F, Leforestier, A, and Lenz, M 2021 Local structure of DNA toroids reveals curvature-dependent intermolecular forces. Nucleic Acids Research, 49(7): 3709–3718. DOI: https://doi.org/10.1093/nar/gkab197

Mukherjee, A, Saurabh, S, Olive, E, Jang, Y H, and Lansac, Y 2021 Protamine Binding Site on DNA: Molecular Dynamics Simulations and Free Energy Calculations with Full Atomistic Details. The Journal of Physical Chemistry B, 125(12): 3032–3044. DOI: https://doi.org/10.1021/acs.jpcb.0c09166

de Izarra, A, Choi, C, Jang, Y H, and Lansac, Y 2021 Ionic Liquid for PEDOT:PSS Treatment. Ion Binding Free Energy in Water Revealing the Importance of Anion Hydrophobicity. The Journal of Physical Chemistry B, 125(7): 1916–1923. DOI: https://doi.org/10.1021/acs.jpcb.0c10068

Marichal, L, Gargowitsch, L, Rubim, R L, Sizun, C, Kra, K, Bressanelli, S, Dong, Y, Panahandeh, S, Zandi, R, and Tresset, G 2021 Relationships between RNA topology and nucleocapsid structure in a model icosahedral virus. Biophysical Journal, 120(18): 3925–3936. DOI: https://doi.org/10.1016/j.bpj.2021.08.021

Chevreuil, M, Lecoq, L, Wang, S, Gargowitsch, L, Nhiri, N, Jacquet, E, Zinn, T, Fieulaine, S, Bressanelli, S, and Tresset, G 2020 Nonsymmetrical Dynamics of the HBV Capsid Assembly and Disassembly Evidenced by Their Transient Species. The Journal of Physical Chemistry B, 124(45): 9987–9995. DOI: https://doi.org/10.1021/acs.jpcb.0c05024

Sanchez-Guzman, D, Giraudon--Colas, G, Marichal, L, Boulard, Y, Wien, F, Degrouard, J, Baeza-Squiban, A, Pin, S, Renault, J P, and Devineau, S 2020 In Situ Analysis of Weakly Bound Proteins Reveals Molecular Basis of Soft Corona Formation. ACS Nano, 14(7): 9073–9088. DOI: https://doi.org/10.1021/acsnano.0c04165

Marichal, L, Degrouard, J, Gatin, A, Raffray, N, Aude, J-C, Boulard, Y, Combet, S, Cousin, F, Hourdez, S, Mary, J, Renault, J-P, and Pin, S 2020 From Protein Corona to Colloidal Self-Assembly: The Importance of Protein Size in Protein–Nanoparticle Interactions. Langmuir, 36(28): 8218–8230. DOI: https://doi.org/10.1021/acs.langmuir.0c01334

Panahandeh, S, Li, S, Marichal, L, Leite Rubim, R, Tresset, G, and Zandi, R 2020 How a Virus Circumvents Energy Barriers to Form Symmetric Shells. ACS Nano, 14(3): 3170–3180. DOI: https://doi.org/10.1021/acsnano.9b08354

Chevreuil, M 2020 Phénomènes dynamiques d’auto-assemblage et désassemblage dans des virus icosaédriques (TH). Orsay, France: Université Paris-Saclay.

Du, H, de Oliveira, F A, Albuquerque, L J C, Tresset, G, Pavlova, E, Huin, C, Guégan, P, and Giacomelli, F C 2020 Polyglycidol-Stabilized Nanoparticles as a Promising Alternative to Nanoparticle PEGylation: Polymer Synthesis and Protein Fouling Considerations. Langmuir, 36(5): 1266–1278. DOI: https://doi.org/10.1021/acs.langmuir.9b03687

Ni, M, Tresset, G, Iliescu, C, and Hauser, C A E 2020 Ultrashort Peptide Theranostic Nanoparticles by Microfluidic-Assisted Rapid Solvent Exchange. IEEE Transactions on NanoBioscience, 19(4): 627–632. DOI: https://doi.org/10.1109/TNB.2020.3007103

Pasquet, M 2019 Influence de la gravité sur la stabilité d’objets savonneux.

Chen, J 2019 Molecular dynamics simulations of the self-assembly of icosahedral viruses. (TH). Orsay (France): Paris Saclay.

Illy, N, Corcé, V, Zimbron, J, Molinié, V, Labourel, M, Tresset, G, Degrouard, J, Salmain, M, and Guégan, P 2019 pH‐Sensitive Poly(ethylene glycol)/Poly(ethoxyethyl glycidyl ether) Block Copolymers: Synthesis, Characterization, Encapsulation, and Delivery of a Hydrophobic Drug. Macromolecular Chemistry and Physics, 1900210. DOI: https://doi.org/10.1002/macp.201900210

Tresset, G 2019 Impact of RNA on the assembly dynamics of icosahedral and tubular viruses.

Gomez, J-P, Tresset, G, Pichon, C, and Midoux, P 2019 Improved histidinylated lPEI polyplexes for skeletal muscle cells transfection. International Journal of Pharmaceutics, 559: 58–67. DOI: https://doi.org/10.1016/j.ijpharm.2019.01.003

Chevreuil, M, Fieulaine, S, Poncet, L, Perronet, K, Zinn, T, Jacquet, E, Nhiri, N, Bressanelli, S, and Tresset, G 2019 Characterization of the Assembly and Disassembly of Capsid Proteins Derived from Hepatitis B Virus. Biophysical Journal, 116(3): 159a. DOI: https://doi.org/10.1016/j.bpj.2018.11.879

Chevreuil, M 2019 Characterization of the assembly and disassembly of capsid proteins derived from Hepatitis B Virus.

Chevreuil, M 2019 Caractérisation de l’assemblage et du désassemblage des protéines de la capside du virus de l’hépatite B.

Burke, A, Chevreuil, M, Paris, A, de La Grange, V, Goldmann, C, Pérez, J, Constantin, D, and Tresset, G 2018 Nanoparticle-Templated Self-Assembly of Viral Capsids Probed by Time-Resolved Absorbance Spectroscopy and X-Ray Scattering. Physical Review Applied, 10(5): 054065–054075. DOI: https://doi.org/10.1103/PhysRevApplied.10.054065

Chen, J, Lansac, Y, and Tresset, G 2018 Interactions between the Molecular Components of the Cowpea Chlorotic Mottle Virus Investigated by Molecular Dynamics Simulations. The Journal of Physical Chemistry B, 122(41): 9490–9498. DOI: https://doi.org/10.1021/acs.jpcb.8b08026

Eltsov, M, Grewe, D, Lemercier, N, Frangakis, A, Livolant, F, and Leforestier, A 2018 Nucleosome conformational variability in solution and in interphase nuclei evidenced by cryo-electron microscopy of vitreous sections. Nucleic Acids Research, 46(17): 9189–9200. DOI: https://doi.org/10.1093/nar/gky670

de Izarra, A, Park, S, Lee, J, Lansac, Y, and Jang, Y H 2018 Ionic Liquid Designed for PEDOT:PSS Conductivity Enhancement. Journal of the American Chemical Society, 140(16): 5375–5384. DOI: https://doi.org/10.1021/jacs.7b10306

Vincenti, B, Douarche, C, and Clement, E 2018 Actuated rheology of magnetic micro-swimmers suspensions: Emergence of motor and brake states. Physical Review Fluids, 3(3): 033302. DOI: https://doi.org/10.1103/PhysRevFluids.3.033302

Chevreuil, M, Law-Hine, D, Chen, J, Bressanelli, S, Combet, S, Constantin, D, Degrouard, J, Möller, J, Zeghal, M, and Tresset, G 2018 Nonequilibrium self-assembly dynamics of icosahedral viral capsids packaging genome or polyelectrolyte. Nature Communications, 9(1). DOI: https://doi.org/10.1038/s41467-018-05426-8

Monmeyran, A, Thomen, P, Jonquière, H, Sureau, F, Li, C, Plamont, M-A, Douarche, C, Casella, J-F, Gautier, A, and Henry, N 2018 The inducible chemical-genetic fluorescent marker FAST outperforms classical fluorescent proteins in the quantitative reporting of bacterial biofilm dynamics. Scientific Reports, 8(1). DOI: https://doi.org/10.1038/s41598-018-28643-z

Chevreuil, M, Law-Hine, D, Chen, J, Bressanelli, S, Combet, S, Constantin, D, Degrouard, J, Möller, J, Zeghal, M, and Tresset, G 2018 Nonequilibrium Self-Assembly Dynamics of Icosahedral Viral Capsids Packaging Genome. Biophysical Journal, 114(3): 60a. DOI: https://doi.org/10.1016/j.bpj.2017.11.378

Tresset, G 2018 Genome- and Polymer-filled Icosahedral Viruses.

Tresset, G 2018 Understanding Virus Self-Assembly from X-ray and Neutron Scattering.

Douarche, C, Bailleux, V, Even, C, Allain, J-M, Regeard, C, and Raspaud, E 2018 La mécanique des biofilms à la surface de liquides, (Reflets de la Physique n° 56).

Tresset, G 2018 Microfluidics-directed self-assembly of DNA-based nanoparticles.

Tresset, G 2018 Chemins Cinétiques d’Assemblage de Capsides Virales Icosaédriques Empaquetant du Génome à ARN.